Application of tests for contagion in point processes to measles, Chlamydia, Lyme disease, and suicide

Main Article Content

Ian McGovern Frederic Schoenberg

Abstract

A recently proposed likelihood-ratio test for identifying causal triggering in point process data is applied to a variety of case counts of diseases of varying infectiousness. The test, suggested by McGovern et al. (2025), involves comparing the likelihood of a fitted Hawkes model to that of a fitted Poisson cluster model, and was shown using simulations to be powerful at discriminating between a process with causal triggering and a process where the clustering is merely due to spatial-temporal inhomogeneity. Here, the test is applied to data on measles, Chlamydia, and Lyme disease in the United States, to see if the test can discern between diseases that are highly contagious, moderately contagious, and not directly contagious from human to human. Measles is a highly contagious disease that spreads rapidly through populations, so it can potentially be modeled accurately using a Hawkes model12. Chlamydia is a sexually transmitted disease that is not as highly contagious as measles since the level of contact needed for exposure is much higher than for measles2. Lyme disease is non-contagious from human to human but cases tend to be highly clustered, as the disease is primarily spread through ticks, and this exposure is much more likely to happen during warmer weather16. Further, the test is applied to data on adolescent suicides in the United States, in order to investigate the hypothesis that such suicides are an epidemic spread by social contagion. The results show that the test is able to measure the degree of contagion of a disease, and the results suggest that there is indeed a small but statistically significant element of contagion to youth suicides.

Keywords: Epidemic disease, Hawkes process, Infectious disease, Inhomogeneous Poisson process, Poisson cluster process, test for triggering

Article Details

How to Cite
MCGOVERN, Ian; SCHOENBERG, Frederic. Application of tests for contagion in point processes to measles, Chlamydia, Lyme disease, and suicide. Medical Research Archives, [S.l.], v. 12, n. 9, oct. 2024. ISSN 2375-1924. Available at: <https://esmed.org/MRA/mra/article/view/5916>. Date accessed: 26 oct. 2024. doi: https://doi.org/10.18103/mra.v12i9.5916.
Section
Research Articles

References

[1] M. Ali, D. Dwyer, and J. Rizzo. “The social contagion effect of suicidal behavior in adolescents: does it really exist?” In: The journal of mental health policy and economics 14.1 (Mar. 2011), pp. 3–12. issn: 1091-4358. url: http:// europepmc.org/abstract/MED/21642746

[2] C.L. Althaus, K. Turner, Schmid B., Low N., J.C.M Heinje, and M. Kretzshmar. “Transmission of Chlamydia trachomatis through sexual partnerships: a comparison between three individual-based models and empirical data”. In: R. Soc. Interface (2012).

[3] P.S. Bearman and J. Moody. “Suicide and Friendships Among American Adolescents”. In: American Journal of Public Health 94.1 (2004). PMID: 14713704, pp. 89–95. doi: 10.2105/AJPH.94.1.89. eprint: https://doi.org/10.2105/AJPH.94.1.89. url: https://doi.org/10. 2105/AJPH.94.1.89.

[4] R. Browning, D. Sulem, K. Mengersen, V. Rivoirard, and J. Rousseau. “Simple discretetime self-exciting models can describe complex dynamic processes: A case study of COVID19”. In: PLOS ONE 16.4 (Apr. 2021), pp. 1– 28. doi: 10.1371/journal.pone.0250015. url:https://doi.org/10.1371/journal.pone.0250015.

[5] Q. Cheng, H. Li, V. Silenzio, and E. Caine. “Suicide Contagion: A Systematic Review of Definitions and Research Utility”. In: PLOS ONE 9.9 (Sept. 2014), pp. 1–9. doi: 10.1371/journal.pone.0108724. url:https://doi.org/10. 1371/journal.pone.0108724.

[6] Q. Cheng, H. Li, V. Silenzio, and E.D. Caine. “Suicide Contagion: A Systematic Review of Definitions and Research Utility”. In: PLOS ONE 9.9 (Sept. 2014), pp. 1–9. doi: 10.1371/ journal.pone.0108724. url:https://doi.org/10. 1371/journal.pone.0108724.

[7] D. J. Daley and D. Vere-Jones. “Scoring probability forecasts for point processes: the entropy score and information gain”. In: Journal of Applied Probability (2016).

[8] P. J. Diggle. Statistical Analysis of Spatial and Spatio-Temporal Point Patterns. CRC Press, 2014.

[9] D. Harte and D. Vere-Jones. “The Entropy Score and its Uses in Earthquake Forecasting”. In: Pure Applied Geophysics 162 (2005).

[10] A. Hawkes. “Spectra of some self-exciting and mutually exciting point processes”. In: Biometrika 58.1 (Apr.1971), pp. 83–90. issn: 0006-3444. doi: 10.1093/biomet/58.1.83. eprint: https://academic.oup.com/biomet/article-pdf/58/1/83/602628/58-1-83.pdf. url: https://doi.org/10.1093/biomet/58.1.83.

[11] S. Jarvi, B. Jackson, B. Swenson, and H. Crawford. “The Impact of Social Contagion on NonSuicidal Self-Injury: A Review of the Literature”. In: Archives of Suicide Research 17.1 (2013). PMID: 23387399, pp. 1–19. doi: 10. 1080/13811118 .2013 . 748404 . eprint: https : //doi.org/10.1080/13811118.2013.748404. url: https://doi.org/10.1080/13811118.2013. 748404.

[12] B.M. Laksono, R.D. De Vries, S. McQuaid, W. P. Duprex, and R.L. De Swart. “Measles Virus Host Invasion and Pathogenesis”. In: Viruses 8.8 (2016). issn: 1999-4915. doi: 10. 3390/v8080210. url: https://www.mdpi.com/ 1999-4915/8/8/210.

[13] J. Neyman and E. Scott. “Statistical Approach to Problems of Cosmology”. In: Journal of the Royal Statistical Society 20.1 (1958), pp. 1–43.

[14] Y. Ogata. “The asymptotic behaviour of maximum likelihood estimators for stationary point processes”. In: Ann Inst Stat Math 30 (1978), pp. 243–261. url: https://doi.org/10.1007/ BF02480216.

[15] W. van Panhuis. “Contagious diseases in the United States from 1888 to the present.” In: The New England journal of medicine 369.22 (2013). doi: 10.1056/NEJMms1215400.

[16] A. Roome, R. Spathis, L. Hill, J.M. Darcy, and Ralph M. Garruto. “Lyme Disease Transmission Risk: Seasonal Variation in the Built Environment”. In: Healthcare 6.3 (2018). issn: 22279032. doi: 10.3390/healthcare6030084. url: https://www.mdpi.com/2227-9032/6/3/84.

[17] W. Van Panhuis, A. Cross, and D. Burke. “Counts of Chlamydial infection reported in UNITED STATES OF AMERICA: 19952016”. In: (Apr. 2018). doi: 10.25337/T7/ ptycho.v2.0/US.105629000. url:https://www. tycho.pitt.edu/dataset/US.105629000/.

[18] W. Van Panhuis, A. Cross, and D. Burke. “Counts of Lyme disease reported in UNITED STATES OF AMERICA: 1990-2016”. In: (Apr. 2018). doi: 10.25337/T7/ptycho.v2.0/US. 23502006. url: https://www.tycho.pitt.edu/ dataset/US.23502006/.

[19] W. Van Panhuis, A. Cross, and D. Burke. “Counts of Measles infection reported in UNITED STATES OF AMERICA: 1888-2002”. In: (Apr. 2018). doi: 10.25337/T7/ ptycho.v2.0/US.14189004. url: https://www. tycho.pitt.edu/dataset/US.14189004/.

[20] McGovern I, Brantingham PJ, and Schoenberg F (2025). Testing for causal clustering in point processes. Journal of Applied Science and Innovation Studies, to appear.